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ERRAI-1075: Create APT generator for errai-marshalling (#296)

* Create APT generator for NavigationGraphGenerator

* Start to move errai-marshalling configuration out of EnvUtil clas

* Fixed exposed and nonExposed portable types

* Inline methods and add comment

* Fix NullPointerException

* Move Marshalling configuration out of EnvUtil

* Create MarshallersAptGenerator (not working)

* Prepare MarshallersGenerator to run in APT environment too

* Make errai-marshalling use completely interchangeable ErraiConfiguration implementations

* Fix ClassScanner parameters to use reflections while searching @Portable types

* Make MetaClassFinder available for DefinitionsFactoryImpl

* Add @MappingAlias annotation to ErraiConfiguration

* Make MarshallerAptGenerator work, but with errors

* Scan @ServerMarshallers with MetaClassFinder

* Fix tests and improve GWT environment MetaClassFinder

* Improve MarshallerAptGenerator. References not yet resolved in MarshallerFactoryImpl

* Make ErraiMarshalling.gwt.xml use APT generators and skip creation of abstract classes in generated marshallers

* MarshallerAptGenerator working with both GWT and APT generators

* MarshallerAptGenerator working and generating every Marshaller

* Fix logging in errai-demos

* Fix X marshaller not found (generics)

* Little refactors

* Remove static initialization of ErraiAppPropertiesConfiguration in MarshallingConfiguration

* Remove QualifyingMetaDataFactory property

* Remove unsafe call from errai-ioc decorators logic

* Add PageRequest in ErraiMarshallingModule's configuration

* Rollback parameter type to erased

* Revert "Remove unsafe call from errai-ioc decorators logic"

This reverts commit b496229be2f7ecaa50e9ea4c5951035772d10487.

* Fix issue with generic field/parameters. Add time logs to files generation in APT environment.

* Remove @Portable annotation added by mistake

* Remove unsafeIsAnnotationPresent from HasAnnotations

* Remove unsafe methods from HasAnnotations

* Remove AbstractHasAnnotations class

* Refactor configuration files

* Add tests to new properties in @ErraiApp

* Update comments

* PR final pass

* Remove even more unsafe calls from HasAnnotations implementation

* Removed annotation caches and unnecessary methods from subclasses of HasAnnotations

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Create APT generators for errai-ioc module

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Remove random string from ExportFile names

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    ./jpa/ErraiJpaClientModule.java
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Add Errai APT Generators mechanism

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    ./jpa/rebind/ErraiEntityManagerGenerator.java
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Deprecate Errai modules (details below).

Deprecates:

* JBossLauncher

* errai-forge-addon

* errai-cordova

* errai-jpa

* errai-jpa-datasync

* errai-security-picketlink

Adds deprecation annotations to code and warnings in the documentation.

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    ./jpa/package-info.java
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IP BOM 7.0.0.CR5 (#212)

* [ERRAI-971] upgrade IP BOM to 7.0.0.CR5

* CR5 brings JPA 2.1 + Hibernate 5.x

(upgraded from JPA 2.0 + Hibernate 4.x)

* Fix errai-jpa-client tests and jpa demo GWT compilation errors.

* Add missing attribute to JoinColumn annotation.

* Add ForeignKey and ConstraintMode types.

* Fix HibernateJpaTest/ErraiJpaTest to work with different hibernate behaviour.

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    ./jpa/api/javax/persistence/ConstraintMode.java
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    ./jpa/api/javax/persistence/ForeignKey.java
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ERRAI-944: Entity Manager fails to persist entity with ID of type Long and value 0.

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    ./jpa/client/local/ErraiEntityManager.java
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Add DOM JsTypes to errai-common. Change IsElement to use new HTMLElement wrapper.

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Add missing license headers and update copyright notice in existing headers.

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    ./jpa/client/local/BigIntegerIdGenerator.java
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    ./jpa/client/local/EntityJsonMatcher.java
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    ./jpa/client/local/EntityState.java
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    ./jpa/client/local/ErraiAttribute.java
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    ./jpa/client/local/ErraiEntityManager.java
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    ./jpa/client/local/ErraiEntityType.java
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    ./jpa/client/local/ErraiIdGenerator.java
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    ./jpa/client/local/ErraiIdentifiableType.java
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    ./jpa/client/local/ErraiManagedType.java
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    ./jpa/client/local/ErraiMetamodel.java
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    ./jpa/client/local/ErraiParameter.java
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    ./jpa/client/local/ErraiPluralAttribute.java
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    ./jpa/client/local/ErraiSingularAttribute.java
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Revert "Remove old JBoss and Red Hat license headers. Add new "Red Hat and affiliates" header."

Changes from the reverted commit did not preserve original copyright dates.

This reverts commit d8e735dfe2f6ed25fe9e06b753ae2f6154d76b02.

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    ./jpa/client/local/BigIntegerIdGenerator.java
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    ./jpa/client/local/EntityJsonMatcher.java
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    ./jpa/client/local/EntityState.java
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    ./jpa/client/local/ErraiAttribute.java
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    ./jpa/client/local/ErraiEntityManager.java
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    ./jpa/client/local/ErraiEntityType.java
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    ./jpa/client/local/ErraiIdGenerator.java
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    ./jpa/client/local/ErraiIdentifiableType.java
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    ./jpa/client/local/ErraiManagedType.java
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    ./jpa/client/local/ErraiMetamodel.java
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    ./jpa/client/local/ErraiParameter.java
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    ./jpa/client/local/ErraiPluralAttribute.java
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    ./jpa/client/local/ErraiSingularAttribute.java
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Remove old JBoss and Red Hat license headers. Add new "Red Hat and affiliates" header.

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    ./jpa/client/local/BigIntegerIdGenerator.java
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    ./jpa/client/local/EntityJsonMatcher.java
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    ./jpa/client/local/EntityState.java
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    ./jpa/client/local/ErraiAttribute.java
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    ./jpa/client/local/ErraiEntityManager.java
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    ./jpa/client/local/ErraiEntityType.java
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    ./jpa/client/local/ErraiIdGenerator.java
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    ./jpa/client/local/ErraiIdentifiableType.java
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    ./jpa/client/local/ErraiManagedType.java
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    ./jpa/client/local/ErraiMetamodel.java
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    ./jpa/client/local/ErraiParameter.java
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    ./jpa/client/local/ErraiPluralAttribute.java
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    ./jpa/client/local/ErraiSingularAttribute.java
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Fix several minor issues (descriptions below).

* Add error messages for public fields in normal scoped beans (except @EntryPoint).

* Remove "Concrete" and "Abstract" from toString of Injectables.

* Add tests that lazily-loaded @Page and @Templated beans are in time.

* Don't use universal qualifier for Providers (only for ContextualTypeProvider).

* Add @IOCProducer annotation (for projects that don't depend on CDI @Produces).

* Make provider of ErraiEntityManager to producer so that it also matches EntityManager.

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    ./jpa/client/local/ErraiEntityManager.java
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    ./jpa/client/local/ErraiEntityManagerProducer.java
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Fix issues found in errai-jpa-grocery-list demo (described below).

* Make IoC proxies extend WrappedPortable.

* Make Providers only match exact provided type (like ContextualTypeProviders).

* Make some types @EntryPoints so that they are eagerly loaded on startup.

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ERRAI-590, ERRAI-850, ERRAI-851: Implement new IOC container (more description below).

The new container uses code genererated in multiple files instead

of a single monolithic file. At compile time an implementation of

org.jboss.errai.ioc.client.container.Factory is generated for each bean.

The factory is responsible for requesting dependencies from other

factories to wire the bean, running code generated by decorators,

and cleaning up when the bean is destroyed.

The GWT.create calls for the factories are generated in the

BootstrapperImpl. The BootstrapperImpl now only registers

factories with their respective contexts.

This container has the following differences from behaviour

in the 3.x version of errai-ioc:

* Normal scoped beans must be proxiable.

* The @New qualifier is not supported.

* Normal scoped beans (except @Entrypoint or with @Startup) are lazily instatiated.

* @Alternative beans must be explicitly enabled (even if no other beans match).

* Resolution of types behaves like CDI. Some cases that worked in 3.x may now be ambiguous.

** Injecting a common supertype of multiple concrete classes is ambiguous.

* Different API for programmtically adding beans to bean manager.

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Implemented ERRAI-832: Added support for whitelist and blacklist properties for Errai JPA

Added tests and test cases. Test cases commented out for now. Tests do not pass

Added programming logic but must be updated using Filters and Sets.

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    ./jpa/rebind/ErraiEntityManagerGenerator.java
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Refactored PR-128 to make sure attributes don't cause method to exceed byte limit

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    ./jpa/rebind/ErraiEntityManagerGenerator.java
#126 create own method for every entity type to prevent java function limit of 65536 bytes

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    ./jpa/rebind/ErraiEntityManagerGenerator.java
disables Hibernate @Entity scanning, so server side entities are not found.

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    ./jpa/rebind/ErraiPersistenceUnitInfo.java
Ensured to never generate the cache/debug files in .errai more than once

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No longer printing gen. code to stdout (not needed: gen. code is written to files in .errai)

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    ./jpa/rebind/ErraiEntityManagerGenerator.java
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No longer printing gen. code to stdout (not needed: gen. code is written to files in .errai)

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    ./jpa/rebind/ErraiEntityManagerGenerator.java
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Move client logging dependencies/modules to errai common

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Inherit and configure gwt logging in JpaTest.

This will allow apps using errai-jpa to have their own logging

configurations.

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Add GWT Logging to JPA.gwt.xml

Change errai-jpa-client print calls to slf4j log calls

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    ./jpa/client/local/ErraiEntityManager.java
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    ./jpa/client/local/ErraiManagedType.java
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Add gwt-slf4j to errai-jpa-client

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Now ensuring generated IDs don't overlap between types that share a common superclass

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    ./jpa/client/local/ErraiEntityManager.java
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    ./jpa/client/local/ErraiManagedType.java
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    ./jpa/client/local/IntIdGenerator.java
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    ./jpa/client/local/LongIdGenerator.java
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    ./jpa/client/local/backend/StorageBackend.java
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Added the ability to fetch entities by supertypes rather than exact type matching

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    ./jpa/client/local/ErraiEntityManager.java
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    ./jpa/client/local/ErraiManagedType.java
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    ./jpa/client/local/PersistenceContext.java
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    ./jpa/client/local/backend/StorageBackend.java
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    ./jpa/rebind/ErraiEntityManagerGenerator.java
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Added the ability to query on an entity class which subclasses another entity. (refs ERRAI-645)

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    ./jpa/client/local/TypedQueryFactory.java
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Added support for polymorphic query results (refs ERRAI-645)

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    ./jpa/client/local/ErraiManagedType.java
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